Benchmarking single cell RNA-sequencing analysis pipelines using mixture control experiments | Nature Methods
scAmpi – A versatile pipeline for single-cell RNA-seq analysis from basics to clinics | RNA-Seq Blog
Practical bioinformatics pipelines for single-cell RNA-seq data analysis
Single-cell RNA-seq: Generation of count matrix | In-depth-NGS-Data-Analysis -Course
Single-cell RNA sequencing reveals breast cancer ecosystem, possible new targets for treatment | RNA-Seq Blog
Single cell RNA-seq: An introductory overview and tools for getting started - 10x Genomics
Methods and challenges in the analysis of single-cell RNA-sequencing data - ScienceDirect
ELIXIR-LU - Single cell RNA-seq data analysis with Chipster
Applications of single-cell and bulk RNA sequencing in onco-immunology - ScienceDirect
DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest Neighbors - ScienceDirect
GitHub - theislab/single-cell-tutorial: Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
Single-Cell RNA Sequencing Analysis: A Step-by-Step Overview | SpringerLink
Single-cell RNA-sequencing analyses identify heterogeneity of CD8+ T cell subpopulations and novel therapy targets in melanoma: Molecular Therapy - Oncolytics
Frontiers | Single-Cell RNA-Seq Technologies and Related Computational Data Analysis
A practical guide to single-cell RNA-sequencing for biomedical research and clinical applications | Genome Medicine | Full Text
Tutorial: guidelines for the experimental design of single-cell RNA sequencing studies | Nature Protocols
Single-Cell RNA Sequencing Analysis: A Step-by-Step Overview | SpringerLink
How Single-Cell Sequencing Works | Azenta Life Sciences
Single-cell RNA-seq analysis reveals the progression of human osteoarthritis | Annals of the Rheumatic Diseases